Pseudomonas putida HB3267, B479_07335

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015473 fimbrial usher porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009297 pilus assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13953 PapC C-terminal domain IPR025949 PapC-like, C-terminal domain 270 332 3.1E-14
Gene3D G3DSA:2.60.40.2070 - IPR043142 PapC-like, C-terminal domain superfamily 267 354 9.3E-16
Gene3D G3DSA:2.60.40.2610 Outer membrane usher protein FimD, plug domain IPR042186 Outer membrane usher protein FimD, plug domain 176 264 2.8E-27
PANTHER PTHR30451 OUTER MEMBRANE USHER PROTEIN IPR000015 Outer membrane usher protein 9 349 1.0E-78
Pfam PF00577 Outer membrane usher protein IPR000015 Outer membrane usher protein 9 260 7.3E-56

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.