Pseudomonas putida HB3267, B479_15110

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00448	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00388	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00388	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	446	563	1.85E-28
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	263	427	1.7E-36
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	65	160	3.29E-7
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	250	424	5.24E-34
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	182	257	1.49E-9
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	300	422	5.3E-23
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	23	165	4.3E-20
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	191	259	2.0E-5
Coils	Coil	Coil	-	-	151	189	-
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	447	558	1.7E-18
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	406	419	1.6E-13
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	369	379	1.6E-13
Coils	Coil	Coil	-	-	6	33	-
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	445	558	5.2E-29
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	351	365	1.6E-13
Gene3D	G3DSA:3.40.50.2300	-	-	-	444	564	7.4E-29
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	301	420	1.9E-14
CDD	cd18161	REC_hyHK_blue-like	-	-	447	549	5.76308E-35
Gene3D	G3DSA:1.10.287.130	-	-	-	183	258	1.1E-18
Pfam	PF08448	PAS fold	IPR013656	PAS fold-4	64	153	1.3E-6
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	382	400	1.6E-13
PANTHER	PTHR43065	SENSOR HISTIDINE KINASE	-	-	99	427	8.4E-67

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.