Pseudomonas putida HB3267, B479_24405

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00088
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuh02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00260 chew_2 IPR002545 CheW-like domain 1356 1500 3.8E-23
Gene3D G3DSA:3.40.50.2300 - - - 1531 1650 2.4E-42
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 23 138 2.75E-19
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 575 677 0.022
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 22 143 2.5E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 575 697 7.33E-20
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 575 661 1.98042E-8
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1268 1282 9.6E-12
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 570 703 6.9E-16
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 439 536 7.7E-4
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 890 987 2.4E-8
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1438 1498 7.5E-18
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1041 1178 6.3E-9
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 920 988 1.53594E-7
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1180 1361 1.93E-36
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 439 562 0.0
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1179 1363 1.5E-62
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1178 1363 1.3E-53
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 892 984 2.7E-16
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1227 1363 3.8E-14
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1369 1500 1.5E-20
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 890 1018 8.0E-29
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1363 1496 1.02E-21
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1531 1647 3.27E-37
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 441 528 1.8E-13
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 577 661 1.4E-11
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1529 1642 1.9E-36
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 16 108 1.0E-7
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1223 1364 1.1E-23
CDD cd16916 HATPase_CheA-like - - 1186 1361 1.22288E-79
Coils Coil Coil - - 1072 1099 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1348 1361 9.6E-12
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 295 416 2.69E-11
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 891 1006 4.32E-27
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1531 1642 3.0E-28
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 439 528 1.10637E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 439 569 9.6E-29
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 715 837 2.59E-16
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 716 844 6.2E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 438 562 2.36E-27
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1531 1642 4.66433E-33
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1324 1342 9.6E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.