Pseudomonas putida HB3267, B479_25360

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015891 siderophore transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01374
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03544
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0030288 outer membrane-bounded periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01374
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0031992 energy transducer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01374
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01374 Gram-negative bacterial tonB protein signature IPR003538 Gram-negative bacterial TonB protein 123 133 3.4E-8
NCBIfam TIGR01352 JCVI: TonB family C-terminal domain IPR006260 TonB/TolA, C-terminal 186 262 4.4E-25
Gene3D G3DSA:3.30.1150.10 - - - 92 263 3.5E-24
PRINTS PR01374 Gram-negative bacterial tonB protein signature IPR003538 Gram-negative bacterial TonB protein 201 219 3.4E-8
Pfam PF03544 Gram-negative bacterial TonB protein C-terminal IPR037682 TonB, C-terminal 184 262 4.3E-25
MobiDBLite mobidb-lite consensus disorder prediction - - 121 170 -
MobiDBLite mobidb-lite consensus disorder prediction - - 129 170 -
PANTHER PTHR33446 PROTEIN TONB-RELATED - - 58 263 2.1E-21
SUPERFAMILY SSF74653 TolA/TonB C-terminal domain - - 178 260 8.5E-24
PRINTS PR01374 Gram-negative bacterial tonB protein signature IPR003538 Gram-negative bacterial TonB protein 180 201 3.4E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.