Pseudomonas syringae pv. syringae B728a, Psyr_1104
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006788 | heme oxidation |
Inferred from Sequence Model
Term mapped from: InterPro:PF01126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004392 | heme oxygenase (decyclizing) activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF01126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | heme degradation I | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.910.10 | - | IPR016084 | Haem oxygenase-like, multi-helical | 2 | 194 | 7.6E-45 |
| CDD | cd19166 | HemeO-bac | - | - | 11 | 190 | 1.49934E-44 |
| Pfam | PF01126 | Heme oxygenase | IPR016053 | Haem oxygenase-like | 12 | 189 | 3.5E-18 |
| SUPERFAMILY | SSF48613 | Heme oxygenase-like | IPR016084 | Haem oxygenase-like, multi-helical | 11 | 193 | 2.83E-54 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.