Pseudomonas syringae pv. syringae B728a, Psyr_4986

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF20148	Domain of unknown function (DUF6531)	IPR045351	Domain of unknown function DUF6531	232	305	3.1E-21
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	632	673	0.0082
Gene3D	G3DSA:2.180.10.10	-	-	-	823	1275	4.3E-84
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	676	714	2.2E-5
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1244	1263	2.7E-15
PANTHER	PTHR32305	-	-	-	365	1298	9.4E-32
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	859	894	2.6E-7
Pfam	PF05488	PAAR motif	IPR008727	PAAR motif	73	138	2.4E-16
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	859	894	3.1E-5
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1221	1241	2.7E-15
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	576	609	3.4E-4
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	527	566	2.8E-6
Pfam	PF03527	RHS protein	IPR001826	RHS protein	1173	1206	6.1E-19
NCBIfam	TIGR03696	JCVI: RHS repeat-associated core domain	IPR022385	Rhs repeat-associated core	1200	1276	1.8E-26
Gene3D	G3DSA:2.60.200.60	-	-	-	62	148	2.3E-22
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1167	1187	2.7E-15
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	737	777	1.0E-4
CDD	cd14742	PAAR_RHS	-	-	75	148	7.78283E-35
Gene3D	G3DSA:3.90.930.1	-	-	-	654	770	9.2E-6
Gene3D	G3DSA:2.180.10.10	-	-	-	405	624	1.1E-22
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	527	562	5.8E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.