Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:3.40.190.10 | - | - | - | 123 | 314 | 3.1E-46 |
CDD | cd08481 | PBP2_GcdR_like | - | - | 120 | 314 | 3.74403E-106 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 188 | 285 | 3.1E-46 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 27 | 109 | 4.0E-20 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 115 | 318 | 7.4E-33 |
FunFam | G3DSA:1.10.10.10:FF:000038 | Glycine cleavage system transcriptional activator | - | - | 30 | 113 | 9.2E-30 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 33 | 325 | 1.3E-68 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 27 | 106 | 6.18E-20 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 34 | 90 | 1.5E-18 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 68 | 79 | 2.0E-8 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 58 | 68 | 2.0E-8 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 47 | 58 | 2.0E-8 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 120 | 322 | 4.52E-34 |
FunFam | G3DSA:3.40.190.10:FF:000017 | Glycine cleavage system transcriptional activator | - | - | 188 | 285 | 5.2E-25 |