Pseudomonas syringae pv. syringae B728a, Psyr_5126

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015078 proton transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00137
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015986 ATP synthesis coupled proton transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1902600 proton transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00137
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psb00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psb01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.20.20.10:FF:000002 ATP synthase subunit c - - 2 77 8.7E-32
Gene3D G3DSA:1.20.20.10 F1F0 ATP synthase subunit C IPR038662 F1F0 ATP synthase subunit C superfamily 2 77 1.5E-27
PRINTS PR00124 ATP synthase C subunit signature IPR000454 ATP synthase, F0 complex, subunit C 32 47 1.5E-6
NCBIfam TIGR01260 JCVI: ATP synthase F0 subunit C IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast 20 76 4.9E-29
CDD cd18185 ATP-synt_Fo_c_ATPE - - 9 73 1.97544E-17
PRINTS PR00124 ATP synthase C subunit signature IPR000454 ATP synthase, F0 complex, subunit C 11 30 1.5E-6
SUPERFAMILY SSF81333 F1F0 ATP synthase subunit C IPR035921 F/V-ATP synthase subunit C superfamily 3 78 1.15E-18
PRINTS PR00124 ATP synthase C subunit signature IPR000454 ATP synthase, F0 complex, subunit C 49 74 1.5E-6
Hamap MF_01396 ATP synthase subunit c [atpH]. IPR000454 ATP synthase, F0 complex, subunit C 9 74 14.111688
Pfam PF00137 ATP synthase subunit C IPR002379 V-ATPase proteolipid subunit C-like domain 10 72 3.1E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.