Pseudomonas aeruginosa UCBPP-PA14, PA14_08920 (rplP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF54686
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF54686
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019843 rRNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF54686
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01164 JCVI: 50S ribosomal protein L16 IPR000114 Large ribosomal subunit protein uL16, bacterial-type 2 126 7.5E-60
SUPERFAMILY SSF54686 Ribosomal protein L16p/L10e IPR036920 Large ribosomal subunit protein uL16 superfamily 1 134 4.19E-53
PANTHER PTHR12220 50S/60S RIBOSOMAL PROTEIN L16 IPR000114 Large ribosomal subunit protein uL16, bacterial-type 4 135 1.8E-52
CDD cd01433 Ribosomal_L16_L10e IPR016180 Large ribosomal subunit protein uL16 domain 23 112 8.42397E-43
PRINTS PR00060 Ribosomal protein L16 signature IPR000114 Large ribosomal subunit protein uL16, bacterial-type 24 36 1.4E-39
FunFam G3DSA:3.90.1170.10:FF:000001 50S ribosomal protein L16 - - 1 137 3.6E-68
PRINTS PR00060 Ribosomal protein L16 signature IPR000114 Large ribosomal subunit protein uL16, bacterial-type 58 87 1.4E-39
PRINTS PR00060 Ribosomal protein L16 signature IPR000114 Large ribosomal subunit protein uL16, bacterial-type 42 53 1.4E-39
Pfam PF00252 Ribosomal protein L16p/L10e IPR047873 Large ribosomal subunit protein uL16 4 132 8.7E-49
Gene3D G3DSA:3.90.1170.10 Ribosomal protein L10e/L16 IPR036920 Large ribosomal subunit protein uL16 superfamily 1 137 1.9E-62
PRINTS PR00060 Ribosomal protein L16 signature IPR000114 Large ribosomal subunit protein uL16, bacterial-type 88 117 1.4E-39
Hamap MF_01342 50S ribosomal protein L16 [rplP]. IPR000114 Large ribosomal subunit protein uL16, bacterial-type 1 134 38.119705

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.