Pseudomonas aeruginosa UCBPP-PA14, PA14_09180 (uvrA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009380 excinuclease repair complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1490.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006289 nucleotide-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03420 Nucleotide excision repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1580.10 ABC transporter ATPase like domain - - 92 518 0.0
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 612 910 1.22E-52
Pfam PF17760 UvrA interaction domain IPR041102 UvrA, interaction domain 130 237 8.9E-41
CDD cd03270 ABC_UvrA_I - - 4 116 2.89597E-75
Gene3D G3DSA:1.10.8.280 - - - 319 437 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 6 580 0.0
Gene3D G3DSA:1.20.1580.10 ABC transporter ATPase like domain - - 693 830 0.0
FunFam G3DSA:1.20.1580.10:FF:000002 UvrABC system protein A - - 693 830 1.5E-81
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 609 937 0.0
FunFam G3DSA:3.30.190.20:FF:000003 UvrABC system protein A - - 135 244 1.1E-49
Hamap MF_00205 UvrABC system protein A [uvrA]. IPR004602 UvrABC system subunit A 1 940 22.88081
NCBIfam TIGR00630 JCVI: excinuclease ABC subunit UvrA IPR004602 UvrABC system subunit A 3 925 0.0
Gene3D G3DSA:3.30.1490.20 - IPR013815 ATP-grasp fold, subdomain 1 209 282 0.0
Pfam PF17755 UvrA DNA-binding domain IPR041552 UvrA DNA-binding domain 291 399 7.0E-32
FunFam G3DSA:1.10.8.280:FF:000001 UvrABC system protein A - - 288 404 1.1E-51
CDD cd03271 ABC_UvrA_II - - 617 921 0.0
PANTHER PTHR43152 UVRABC SYSTEM PROTEIN A - - 2 942 0.0
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 6 569 3.41E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.