Pseudomonas aeruginosa UCBPP-PA14, PA14_11430 (ribH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009349 riboflavin synthase complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF52121
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd09209
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009231 riboflavin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd09209
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00740 Riboflavin metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase IPR002180 Lumazine/riboflavin synthase 16 152 3.2E-56
NCBIfam TIGR00114 JCVI: 6,7-dimethyl-8-ribityllumazine synthase IPR034964 Lumazine synthase 16 151 2.9E-53
PANTHER PTHR21058 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASE IPR034964 Lumazine synthase 15 157 1.5E-53
Gene3D G3DSA:3.40.50.960 Lumazine/riboflavin synthase IPR036467 Lumazine/riboflavin synthase superfamily 3 157 1.0E-60
CDD cd09209 Lumazine_synthase-I IPR034964 Lumazine synthase 17 149 5.14788E-76
FunFam G3DSA:3.40.50.960:FF:000001 6,7-dimethyl-8-ribityllumazine synthase - - 3 157 1.1E-73
SUPERFAMILY SSF52121 Lumazine synthase IPR036467 Lumazine/riboflavin synthase superfamily 5 155 7.2E-61
Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. IPR034964 Lumazine synthase 10 155 30.962444

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.