Pseudomonas aeruginosa UCBPP-PA14, PA14_11560 (ispA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0008299	isoprenoid biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00685	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pau01130	Biosynthesis of antibiotics	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pau01110	Biosynthesis of secondary metabolites	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pau00900	Terpenoid backbone biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pau01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF48576	Terpenoid synthases	IPR008949	Isoprenoid synthase domain superfamily	5	287	1.15E-86
SFLD	SFLDS00005	Isoprenoid Synthase Type I	-	-	5	293	0.0
CDD	cd00685	Trans_IPPS_HT	IPR000092	Polyprenyl synthetase	26	293	2.7311E-73
Pfam	PF00348	Polyprenyl synthetase	IPR000092	Polyprenyl synthetase	29	259	4.7E-58
SFLD	SFLDG01017	Polyprenyl Transferase Like	-	-	5	293	0.0
Gene3D	G3DSA:1.10.600.10	Farnesyl Diphosphate Synthase	IPR008949	Isoprenoid synthase domain superfamily	1	295	4.6E-107
PANTHER	PTHR43281	FARNESYL DIPHOSPHATE SYNTHASE	-	-	4	294	7.7E-95
FunFam	G3DSA:1.10.600.10:FF:000001	Geranylgeranyl diphosphate synthase	-	-	1	295	1.4E-115

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.