Pseudomonas aeruginosa UCBPP-PA14, PA14_11570 (xseB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009318 exodeoxyribonuclease VII complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02609
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006308 DNA catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02609
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008855 exodeoxyribonuclease VII activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02609
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03430 Mismatch repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF006488 ExoVII_small IPR003761 Exonuclease VII, small subunit 1 80 2.5E-22
Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. IPR003761 Exonuclease VII, small subunit 8 68 16.080175
Gene3D G3DSA:1.10.287.1040 Exonuclease VII, small subunit IPR037004 Exonuclease VII, small subunit superfamily 2 79 5.8E-23
NCBIfam TIGR01280 JCVI: exodeoxyribonuclease VII small subunit IPR003761 Exonuclease VII, small subunit 8 63 2.5E-21
FunFam G3DSA:1.10.287.1040:FF:000011 Exodeoxyribonuclease 7 small subunit - - 2 79 3.2E-52
Pfam PF02609 Exonuclease VII small subunit IPR003761 Exonuclease VII, small subunit 9 60 8.9E-20
SUPERFAMILY SSF116842 XseB-like IPR037004 Exonuclease VII, small subunit superfamily 3 68 4.18E-21
PANTHER PTHR34137 EXODEOXYRIBONUCLEASE 7 SMALL SUBUNIT IPR003761 Exonuclease VII, small subunit 2 76 9.5E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.