Pseudomonas aeruginosa UCBPP-PA14, PA14_11970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10429
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003905 alkylbase DNA N-glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10429
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10429
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03410 Base excision repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF50486 FMT C-terminal domain-like IPR011034 Formyl transferase-like, C-terminal domain superfamily 15 220 3.45E-53
FunFam G3DSA:3.10.300.10:FF:000003 Putative 3-methyladenine DNA glycosylase - - 12 216 0.0
PANTHER PTHR10429 DNA-3-METHYLADENINE GLYCOSYLASE IPR003180 Methylpurine-DNA glycosylase 10 207 1.5E-35
Pfam PF02245 Methylpurine-DNA glycosylase (MPG) IPR003180 Methylpurine-DNA glycosylase 21 206 2.2E-36
Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. IPR003180 Methylpurine-DNA glycosylase 19 213 25.84057
CDD cd00540 AAG IPR003180 Methylpurine-DNA glycosylase 21 213 3.91171E-60
Gene3D G3DSA:3.10.300.10 - IPR036995 Methylpurine-DNA glycosylase superfamily 12 216 5.1E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.