Pseudomonas aeruginosa UCBPP-PA14, PA14_13340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006308 DNA catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3909
 ECO:0000249
sequence similarity evidence used in automatic assertion		 20370819
Molecular Function GO:0004536 deoxyribonuclease activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3909
 ECO:0000249
sequence similarity evidence used in automatic assertion		 20370819
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03372
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd10283 MnuA_DNase1-like - - 455 768 1.15166E-52
Gene3D G3DSA:3.60.10.10 Endonuclease/exonuclease/phosphatase IPR036691 Endonuclease/exonuclease/phosphatase superfamily 455 768 9.2E-37
CDD cd04486 YhcR_OBF_like - - 222 302 1.717E-28
PANTHER PTHR42834 ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_3G09210) - - 16 770 0.0
Pfam PF03372 Endonuclease/Exonuclease/phosphatase family IPR005135 Endonuclease/exonuclease/phosphatase 458 761 1.2E-8
NCBIfam NF033681 NCBIFAM: ExeM/NucH family extracellular endonuclease IPR047971 Extracellular endonuclease ExeM-like 222 770 0.0
FunFam G3DSA:3.60.10.10:FF:000072 Extracellular nuclease - - 455 768 0.0
Pfam PF00932 Lamin Tail Domain IPR001322 Lamin tail domain 21 129 1.1E-15
SUPERFAMILY SSF56219 DNase I-like IPR036691 Endonuclease/exonuclease/phosphatase superfamily 453 769 3.74E-36

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.