Pseudomonas aeruginosa UCBPP-PA14, PA14_14860
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF47413
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.260.40 | - | IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | 10 | 110 | 5.1E-26 |
| SMART | SM00530 | mbf_short4 | IPR001387 | Cro/C1-type helix-turn-helix domain | 21 | 82 | 4.5E-6 |
| PANTHER | PTHR34475 | - | - | - | 6 | 346 | 7.0E-84 |
| SUPERFAMILY | SSF47413 | lambda repressor-like DNA-binding domains | IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | 17 | 86 | 3.85E-8 |
| CDD | cd00093 | HTH_XRE | IPR001387 | Cro/C1-type helix-turn-helix domain | 19 | 82 | 2.02408E-9 |
| Pfam | PF13413 | Helix-turn-helix domain | - | - | 21 | 81 | 2.4E-21 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 21 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 179 | 262 | - |
| Pfam | PF13464 | Domain of unknown function (DUF4115) | IPR025194 | Domain of unknown function DUF4115 | 272 | 345 | 2.2E-23 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.