Pseudomonas aeruginosa UCBPP-PA14, PA14_14880 (ispG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0016114 terpenoid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00159
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008299 isoprenoid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004640
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004640
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0044237 cellular metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51717
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00159
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other UCBPP-PA14 genes in this class
Fatty acid and phospholipid metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00900 Terpenoid backbone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF004640 IspG IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial 3 364 0.0
Pfam PF04551 GcpE protein IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type 15 354 0.0
SUPERFAMILY SSF51717 Dihydropteroate synthetase-like IPR011005 Dihydropteroate synthase-like 17 209 1.49E-10
Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type 9 361 35.44059
Coils Coil Coil - - 342 366 -
NCBIfam TIGR00612 JCVI: (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type 11 353 0.0
Gene3D G3DSA:3.30.413.10 Sulfite Reductase Hemoprotein, domain 1 IPR045854 Nitrite and sulphite reductase 4Fe-4S domain-like superfamily 264 363 3.3E-26
FunFam G3DSA:3.20.20.20:FF:000001 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) - - 5 263 0.0
PANTHER PTHR30454 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type 4 255 0.0
Gene3D G3DSA:3.20.20.20 - IPR011005 Dihydropteroate synthase-like 2 263 9.3E-109
SUPERFAMILY SSF56014 Nitrite and sulphite reductase 4Fe-4S domain-like IPR045854 Nitrite and sulphite reductase 4Fe-4S domain-like superfamily 267 354 3.6E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.