Pseudomonas aeruginosa UCBPP-PA14, PA14_15200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33376
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | NF037995 | NCBIFAM: TRAP transporter substrate-binding protein DctP | - | - | 51 | 311 | 2.5E-45 |
| Gene3D | G3DSA:3.40.190.170 | - | IPR038404 | TRAP transporter solute receptor DctP superfamily | 32 | 344 | 2.6E-108 |
| CDD | cd13677 | PBP2_TRAP_SBP_like_6 | - | - | 34 | 337 | 0.0 |
| Pfam | PF03480 | Bacterial extracellular solute-binding protein, family 7 | IPR018389 | TRAP transporter solute receptor DctP | 45 | 321 | 5.3E-82 |
| Coils | Coil | Coil | - | - | 267 | 287 | - |
| PANTHER | PTHR33376 | - | IPR018389 | TRAP transporter solute receptor DctP | 12 | 327 | 1.8E-70 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.