Pseudomonas aeruginosa UCBPP-PA14, PA14_15920

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00083
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00083
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00083
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.20.1250.20:FF:000001 Dicarboxylate MFS transporter - - 18 235 4.0E-79
Pfam PF00083 Sugar (and other) transporter IPR005828 Major facilitator, sugar transporter-like 23 232 3.7E-24
Pfam PF00083 Sugar (and other) transporter IPR005828 Major facilitator, sugar transporter-like 234 429 4.0E-13
NCBIfam TIGR00883 JCVI: metabolite/H+ symporter IPR004736 MFS transporter, metabolite:H symporter 28 419 0.0
PANTHER PTHR43045 SHIKIMATE TRANSPORTER - - 7 433 0.0
CDD cd17369 MFS_ShiA_like - - 20 399 0.0
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 18 432 3.92E-64
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 17 437 2.0E-55

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.