Pseudomonas aeruginosa UCBPP-PA14, PA14_17150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01103
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071709 membrane assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01430
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other UCBPP-PA14 genes in this class
Transport of small molecules Other UCBPP-PA14 genes in this class
Membrane proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.10.20.310 membrane protein fhac - - 346 420 5.7E-25
Pfam PF07244 Surface antigen variable number repeat IPR010827 POTRA domain, BamA/TamA-like 265 343 4.0E-15
Pfam PF07244 Surface antigen variable number repeat IPR010827 POTRA domain, BamA/TamA-like 347 419 9.3E-16
PIRSF PIRSF006076 Omp85 IPR023707 Outer membrane protein assembly factor BamA 1 794 0.0
NCBIfam TIGR03303 JCVI: outer membrane protein assembly factor BamA IPR023707 Outer membrane protein assembly factor BamA 23 794 0.0
Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. IPR023707 Outer membrane protein assembly factor BamA 1 794 25.948288
Gene3D G3DSA:3.10.20.310 membrane protein fhac - - 17 90 2.6E-19
PANTHER PTHR12815 SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER IPR039910 Surface antigen D15-like 131 791 3.4E-49
FunFam G3DSA:3.10.20.310:FF:000002 Outer membrane protein assembly factor BamA - - 174 263 4.5E-42
Pfam PF07244 Surface antigen variable number repeat IPR010827 POTRA domain, BamA/TamA-like 92 171 2.2E-13
MobiDBLite mobidb-lite consensus disorder prediction - - 655 685 -
Gene3D G3DSA:3.10.20.310 membrane protein fhac - - 91 172 1.4E-19
Pfam PF07244 Surface antigen variable number repeat IPR010827 POTRA domain, BamA/TamA-like 175 262 7.1E-17
Gene3D G3DSA:3.10.20.310 membrane protein fhac - - 266 345 1.5E-18
FunFam G3DSA:3.10.20.310:FF:000001 Outer membrane protein assembly factor BamA - - 346 422 1.3E-39
Gene3D G3DSA:2.40.160.50 membrane protein fhac: a member of the omp85/tpsb transporter family - - 422 794 2.2E-97
FunFam G3DSA:3.10.20.310:FF:000015 Outer membrane protein assembly factor BamA - - 91 172 8.3E-40
Pfam PF01103 Omp85 superfamily domain IPR000184 Bacterial surface antigen (D15) 447 794 3.8E-97
Gene3D G3DSA:3.10.20.310 membrane protein fhac - - 175 265 9.4E-24
FunFam G3DSA:3.10.20.310:FF:000003 Outer membrane protein assembly factor BamA - - 18 90 2.6E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.