Pseudomonas aeruginosa UCBPP-PA14, PA14_20820

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class
Motility & Attachment Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd01949 GGDEF IPR000160 GGDEF domain 224 388 7.75667E-58
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 222 386 5.3E-49
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 215 389 1.0E-55
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 219 388 3.4E-48
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 227 388 2.04E-44
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 217 389 9.9E-53
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 210 389 1.0E-63
Coils Coil Coil - - 315 335 -
SMART SM00267 duf1_3 IPR000160 GGDEF domain 211 389 7.5E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.