Pseudomonas aeruginosa UCBPP-PA14, PA14_46860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR45229
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016831 carboxy-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03709
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR45229
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 235 350 1.2E-12
Gene3D G3DSA:3.90.100.10 - - - 378 498 2.1E-27
Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IPR005308 Orn/Lys/Arg decarboxylase, N-terminal 25 136 2.2E-8
Gene3D G3DSA:3.40.50.2300 - - - 10 141 3.6E-16
SUPERFAMILY SSF55904 Ornithine decarboxylase C-terminal domain IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily 353 496 1.11E-23
Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IPR008286 Orn/Lys/Arg decarboxylase, C-terminal 358 487 3.3E-34
PANTHER PTHR45229 CONSTITUTIVE ORNITHINE DECARBOXYLASE IPR011193 Ornithine/lysine/arginine decarboxylase 256 494 1.8E-54
Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain IPR000310 Orn/Lys/Arg decarboxylase, major domain 256 330 1.1E-15
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 212 377 1.3E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.