Pseudomonas aeruginosa UCBPP-PA14, PA14_55450 (hxcQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00263
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.1370.120 - IPR038591 NolW-like superfamily 261 330 6.8E-13
Gene3D G3DSA:3.30.1370.120 - IPR038591 NolW-like superfamily 337 479 5.1E-14
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 696 714 1.2E-26
FunFam G3DSA:3.30.1370.120:FF:000011 Type II secretion system protein - - 94 256 4.9E-66
Gene3D G3DSA:3.30.1370.120 - IPR038591 NolW-like superfamily 95 256 9.9E-49
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 482 492 1.2E-26
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 199 259 2.0E-10
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 719 733 1.2E-26
MobiDBLite mobidb-lite consensus disorder prediction - - 385 413 -
MobiDBLite mobidb-lite consensus disorder prediction - - 32 67 -
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 597 607 1.2E-26
MobiDBLite mobidb-lite consensus disorder prediction - - 360 436 -
PANTHER PTHR30332 PROBABLE GENERAL SECRETION PATHWAY PROTEIN D - - 9 756 0.0
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 263 332 3.6E-12
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 562 586 1.2E-26
Pfam PF00263 Bacterial type II and III secretion system protein IPR004846 Type II/III secretion system 566 732 3.4E-47
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 339 482 1.4E-11
NCBIfam TIGR02517 JCVI: type II secretion system secretin GspD IPR013356 Type II secretion system protein GspD 104 741 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.