Pseudomonas aeruginosa UCBPP-PA14, PA14_55810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06170
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.10.10:FF:001465 DNA-binding response regulator - - 201 269 2.8E-49
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 9 161 2.56E-26
SMART SM00421 luxrmega5 IPR000792 Transcription regulator LuxR, C-terminal 204 261 2.4E-17
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 237 249 1.2E-8
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 201 269 3.6E-17
PANTHER PTHR43214 TWO-COMPONENT RESPONSE REGULATOR IPR039420 Transcriptional regulatory protein WalR-like 5 260 2.3E-32
MobiDBLite mobidb-lite consensus disorder prediction - - 173 205 -
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 11 122 4.9E-19
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 9 124 1.4E-17
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 207 259 2.7E-15
CDD cd00156 REC - - 12 114 6.54068E-22
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 207 221 1.2E-8
Gene3D G3DSA:3.40.50.2300 - - - 9 134 5.4E-24
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 221 237 1.2E-8
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 199 260 7.82E-16
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 207 258 2.57564E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.