Pseudomonas aeruginosa UCBPP-PA14, PA14_56890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR32063
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR32063
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR32063
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Antibiotic resistance and susceptibility Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01501 beta-Lactam resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.1430 Multidrug efflux transporter AcrB pore domain - - 40 797 0.0
Gene3D G3DSA:1.20.1640.10 Multidrug efflux transporter AcrB transmembrane domain - - 495 999 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 356 377 2.1E-75
SUPERFAMILY SSF82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 699 781 7.06E-17
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 650 832 1.88E-15
FunFam G3DSA:1.20.1640.10:FF:000001 Efflux pump membrane transporter - - 313 501 6.2E-71
Gene3D G3DSA:3.30.70.1440 Multidrug efflux transporter AcrB pore domain - - 651 846 0.0
Gene3D G3DSA:3.30.2090.10 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 179 271 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 38 56 2.1E-75
Pfam PF00873 AcrB/AcrD/AcrF family IPR001036 Acriflavin resistance protein 6 1002 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 540 557 2.1E-75
SUPERFAMILY SSF82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 183 264 3.53E-16
PANTHER PTHR32063 - IPR001036 Acriflavin resistance protein 1 1004 0.0
Gene3D G3DSA:3.30.2090.10 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 701 789 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 462 485 2.1E-75
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 553 650 4.45E-23
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 603 617 2.1E-75
Gene3D G3DSA:3.30.70.1430 Multidrug efflux transporter AcrB pore domain - - 558 650 0.0
Gene3D G3DSA:1.20.1640.10 Multidrug efflux transporter AcrB transmembrane domain - - 9 494 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 329 352 2.1E-75
Gene3D G3DSA:3.30.70.1320 Multidrug efflux transporter AcrB pore domain like - - 134 324 0.0
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 137 323 6.28E-24
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 42 132 4.45E-20
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 384 408 2.1E-75
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 10 34 2.1E-75
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain - - 808 1003 4.19E-44
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 437 460 2.1E-75
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain - - 290 490 3.4E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.