Pseudomonas aeruginosa UCBPP-PA14, PA14_57560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008121 ubiquinol-cytochrome-c reductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038885
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00284
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00284
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0045275 respiratory chain complex III
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038885
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038885
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0022904 respiratory electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF81342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00284 Cytochrome_b_N IPR005797 Cytochrome b/b6, N-terminal 21 213 3.52542E-73
SUPERFAMILY SSF81342 Transmembrane di-heme cytochromes IPR016174 Di-haem cytochrome, transmembrane 13 279 1.27E-96
Pfam PF00032 Cytochrome b(C-terminal)/b6/petD IPR005798 Cytochrome b/b6, C-terminal 278 379 2.6E-43
SUPERFAMILY SSF81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) IPR036150 Cytochrome b/b6, C-terminal domain superfamily 281 396 5.01E-33
Gene3D G3DSA:1.20.810.10 Cytochrome Bc1 Complex; Chain C IPR027387 Cytochrome b/b6-like domain superfamily 1 403 0.0
FunFam G3DSA:1.20.810.10:FF:000004 Cytochrome b - - 1 403 0.0
Pfam PF00033 Cytochrome b/b6/petB IPR005797 Cytochrome b/b6, N-terminal 24 211 9.4E-68
PANTHER PTHR19271 CYTOCHROME B - - 14 388 1.9E-115
PIRSF PIRSF038885 COB IPR030689 Cytochrome b 1 403 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.