Pseudomonas aeruginosa UCBPP-PA14, PA14_58190 (gatB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016874 ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02934
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00121
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55931
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 2 480 38.690907
Pfam PF02934 GatB/GatE catalytic domain IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic 5 288 3.0E-110
NCBIfam TIGR00133 JCVI: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 2 479 0.0
PANTHER PTHR11659 GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E 2 480 0.0
FunFam G3DSA:1.10.150.380:FF:000001 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B - - 296 351 7.8E-25
Gene3D G3DSA:1.10.150.380 - IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 296 352 1.7E-12
Gene3D G3DSA:1.10.10.410 - IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 415 481 1.2E-24
Pfam PF02637 GatB domain IPR018027 Asn/Gln amidotransferase 328 479 1.3E-52
SUPERFAMILY SSF55931 Glutamine synthetase/guanido kinase IPR014746 Glutamine synthetase/guanido kinase, catalytic domain 4 296 4.12E-120
SUPERFAMILY SSF89095 GatB/YqeY motif IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like 297 402 2.22E-35
FunFam G3DSA:1.10.10.410:FF:000001 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B - - 415 480 9.9E-27
SMART SM00845 gatb_yqey_2 IPR018027 Asn/Gln amidotransferase 328 479 3.7E-79

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.