Pseudomonas aeruginosa UCBPP-PA14, PA14_58600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 148 183 2.1E-6
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 236 250 0.77
SMART SM00671 sel1 IPR006597 Sel1-like repeat 148 183 3.6E-8
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 13 268 4.3E-52
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 41 75 1.0E-5
SMART SM00671 sel1 IPR006597 Sel1-like repeat 40 75 9.6E-7
PANTHER PTHR11102 SEL-1-LIKE PROTEIN - - 25 194 2.6E-30
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 202 215 140.0
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 114 147 9.7E-8
SMART SM00671 sel1 IPR006597 Sel1-like repeat 114 147 9.3E-7
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 77 110 0.061
SMART SM00671 sel1 IPR006597 Sel1-like repeat 76 111 6.6E-5
SUPERFAMILY SSF81901 HCP-like - - 15 251 5.43E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.