Pseudomonas aeruginosa UCBPP-PA14, PA14_60190 (clpB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0042026 protein refolding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03346
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009408 response to heat
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03346
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03346
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07724
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chaperones & heat shock proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 342 444 1.9E-36
FunFam G3DSA:3.40.50.300:FF:000025 ATP-dependent Clp protease subunit - - 550 762 2.0E-111
Gene3D G3DSA:1.10.1780.10 - IPR036628 Clp, N-terminal domain superfamily 1 147 5.5E-35
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 708 722 5.5E-42
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 646 664 5.5E-42
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 198 343 2.1E-11
FunFam G3DSA:3.40.50.300:FF:000120 ATP-dependent chaperone ClpB - - 343 544 2.3E-83
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 159 545 2.51E-98
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 203 334 5.4E-12
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 148 342 5.3E-82
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 601 619 5.5E-42
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 764 842 7.6E-25
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 344 544 6.3E-71
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 764 853 1.4E-36
PANTHER PTHR11638 ATP-DEPENDENT CLP PROTEASE - - 8 847 0.0
Pfam PF02861 Clp amino terminal domain, pathogenicity island component IPR004176 Clp, repeat (R) domain 94 145 1.0E-9
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 546 852 1.67E-81
Coils Coil Coil - - 412 468 -
SUPERFAMILY SSF81923 Double Clp-N motif IPR036628 Clp, N-terminal domain superfamily 4 155 1.96E-38
FunFam G3DSA:1.10.8.60:FF:000017 ATP-dependent chaperone ClpB - - 764 854 1.9E-29
Coils Coil Coil - - 472 492 -
Gene3D G3DSA:1.10.8.60 - - - 764 854 9.9E-29
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 675 693 5.5E-42
FunFam G3DSA:3.40.50.300:FF:000010 Chaperone clpB 1, putative - - 149 342 2.3E-103
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 597 765 4.0E-11
NCBIfam TIGR03346 JCVI: ATP-dependent chaperone ClpB IPR017730 Chaperonin ClpB 6 853 0.0
CDD cd00009 AAA - - 181 341 3.22859E-21
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 596 758 1.3E-55
FunFam G3DSA:1.10.1780.10:FF:000003 ATP-dependent chaperone ClpB - - 1 147 2.2E-59
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 550 762 4.6E-92
Pfam PF02861 Clp amino terminal domain, pathogenicity island component IPR004176 Clp, repeat (R) domain 17 68 1.3E-12
CDD cd19499 RecA-like_ClpB_Hsp104-like - - 558 761 1.57539E-110

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.