Pseudomonas aeruginosa UCBPP-PA14, PA14_60670 (rtcA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003824	catalytic activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF55205	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003963	RNA-3'-phosphate cyclase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR03399	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006396	RNA processing	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR03399	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF55205	EPT/RTPC-like	IPR013792	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta	5	175	1.77E-58
PIRSF	PIRSF005378	RNA_3-term_P_cyclase	IPR000228	RNA 3'-terminal phosphate cyclase	2	339	2.0E-97
SUPERFAMILY	SSF52913	RNA 3'-terminal phosphate cyclase, RPTC, insert domain	IPR036553	RNA 3'-terminal phosphate cyclase, insert domain superfamily	184	278	3.92E-24
Pfam	PF01137	RNA 3'-terminal phosphate cyclase	IPR023797	RNA 3'-terminal phosphate cyclase domain	12	324	1.9E-77
SUPERFAMILY	SSF55205	EPT/RTPC-like	IPR013792	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta	271	331	9.15E-7
Gene3D	G3DSA:3.65.10.20	-	IPR037136	RNA 3'-terminal phosphate cyclase domain superfamily	6	324	1.8E-114
PANTHER	PTHR11096	RNA 3' TERMINAL PHOSPHATE CYCLASE	IPR000228	RNA 3'-terminal phosphate cyclase	6	324	3.2E-67
FunFam	G3DSA:3.30.360.20:FF:000003	RNA 3'-terminal phosphate cyclase	-	-	183	275	3.0E-37
Pfam	PF05189	RNA 3'-terminal phosphate cyclase (RTC), insert domain	IPR013791	RNA 3'-terminal phosphate cyclase, insert domain	183	272	1.7E-8
CDD	cd00874	RNA_Cyclase_Class_II	-	-	6	324	0.0
Hamap	MF_00200	RNA 3'-terminal phosphate cyclase [rtcA].	IPR017770	RNA 3'-terminal phosphate cyclase type 1	5	338	38.761127
NCBIfam	TIGR03399	JCVI: RNA 3'-terminal-phosphate cyclase	IPR017770	RNA 3'-terminal phosphate cyclase type 1	6	324	5.2E-126
Gene3D	G3DSA:3.30.360.20	-	IPR036553	RNA 3'-terminal phosphate cyclase, insert domain superfamily	183	275	1.8E-114

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.