Pseudomonas aeruginosa UCBPP-PA14, PA14_64640

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_64640
Name
Replicon chromosome
Genomic location 5757762 - 5758391 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_793358.1
GI 116053039
Entrez 4384871
INSDC ABJ14275.1
NCBI Locus Tag PA14_64640
UniParc UPI0000396F09
UniProtKB Acc Q02FC8
UniProtKB ID Q02FC8_PSEAB
UniRef100 UniRef100_A0A071KTD0
UniRef50 UniRef50_Q4KJ31
UniRef90 UniRef90_W0Z0X0

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.92
Kyte-Doolittle Hydrophobicity Value 0.010
Molecular Weight (kDa) 23.0
Isoelectric Point (pI) 8.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3LSR TRANSCRIPTION/DNA 02/12/10 Crystal structure of DesT in complex with duplex DNA Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT 2.55 X-RAY DIFFRACTION 99.5
3LSJ TRANSCRIPTION 02/12/10 Crystal structure of DesT in complex with palmitoyl-CoA Pseudomonas aeruginosa 2.3 X-RAY DIFFRACTION 99.5
3LSP TRANSCRIPTION/DNA 02/12/10 Crystal Structure of DesT bound to desCB promoter and oleoyl-CoA Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT 2.66 X-RAY DIFFRACTION 99.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 92 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004514 (507 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_64640

Human Homologs

References

No references are associated with this feature.