Pseudomonas aeruginosa UCBPP-PA14, PA14_65080

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04055
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04055
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 670 747 -
Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. IPR022946 Uncharacterised protein family UPF0313 23 645 50.872112
Gene3D G3DSA:3.80.30.20 tm_1862 like domain IPR023404 Radical SAM, alpha/beta horseshoe 374 638 3.8E-15
MobiDBLite mobidb-lite consensus disorder prediction - - 680 694 -
SFLD SFLDG01069 UPF0313 IPR022946 Uncharacterised protein family UPF0313 8 692 0.0
SMART SM00729 MiaB IPR006638 Elp3/MiaA/NifB-like, radical SAM core domain 375 628 1.4E-7
SFLD SFLDG01082 B12-binding domain containing - - 51 606 1.0E-20
SFLD SFLDS00029 Radical SAM IPR007197 Radical SAM 8 692 0.0
Pfam PF04055 Radical SAM superfamily IPR007197 Radical SAM 379 584 3.8E-22
Pfam PF11842 Domain of unknown function (DUF3362) IPR024560 UPF0313, C-terminal 593 737 1.1E-54
NCBIfam TIGR03904 JCVI: YgiQ family radical SAM protein IPR022946 Uncharacterised protein family UPF0313 23 643 0.0
Pfam PF08497 Radical SAM N-terminal IPR013704 UPF0313, N-terminal 23 378 0.0
SUPERFAMILY SSF102114 Radical SAM enzymes - - 370 620 4.58E-14
PANTHER PTHR32331 UPF0313 PROTEIN YGIQ IPR022946 Uncharacterised protein family UPF0313 1 691 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.