Pseudomonas aeruginosa UCBPP-PA14, PA14_65810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1490.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other UCBPP-PA14 genes in this class
Energy metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc reductive TCA cycle II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc TCA cycle II (plants and fungi) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc anaerobic energy metabolism (invertebrates, mitochondrial) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc pyruvate fermentation to acetate V InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc partial TCA cycle (obligate autotrophs) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc methylaspartate cycle InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc pyruvate fermentation to acetate VI InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.261 - IPR016102 Succinyl-CoA synthetase-like 291 462 1.7E-24
SUPERFAMILY SSF52210 Succinyl-CoA synthetase domains IPR016102 Succinyl-CoA synthetase-like 129 286 7.06E-32
Gene3D G3DSA:3.30.470.20 - - - 481 691 1.3E-57
Gene3D G3DSA:3.40.50.720 - - - 3 126 5.5E-25
Pfam PF13549 ATP-grasp domain - - 478 693 6.5E-52
Gene3D G3DSA:3.30.1490.20 - IPR013815 ATP-grasp fold, subdomain 1 499 575 1.3E-57
SUPERFAMILY SSF56059 Glutathione synthetase ATP-binding domain-like - - 481 692 5.5E-30
PANTHER PTHR42793 COA BINDING DOMAIN CONTAINING PROTEIN - - 1 463 1.3E-114
SMART SM00881 CoA_binding_2 IPR003781 CoA-binding 9 99 1.5E-18
Pfam PF13380 CoA binding domain IPR003781 CoA-binding 25 130 3.5E-9
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 6 127 9.46E-23
Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain 152 285 2.2E-33
Gene3D G3DSA:3.40.50.261 - IPR016102 Succinyl-CoA synthetase-like 127 286 1.2E-31
SUPERFAMILY SSF52210 Succinyl-CoA synthetase domains IPR016102 Succinyl-CoA synthetase-like 292 454 8.61E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.