Pseudomonas aeruginosa UCBPP-PA14, PA14_66340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0070475 rRNA base methylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00934
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008649 rRNA methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00934
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. IPR007473 Ribosomal RNA large subunit methyltransferase J 1 265 39.858231
FunFam G3DSA:3.40.50.150:FF:000037 Ribosomal RNA large subunit methyltransferase J - - 1 278 7.0E-114
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 8 274 1.33E-89
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 1 278 1.8E-104
Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IPR007473 Ribosomal RNA large subunit methyltransferase J 32 276 2.2E-114
PANTHER PTHR37426 RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE J IPR007473 Ribosomal RNA large subunit methyltransferase J 1 278 4.0E-121

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.