Pseudomonas aeruginosa UCBPP-PA14, PA14_67300

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04069
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04069
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04069
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system IPR007210 ABC-type glycine betaine transport system, substrate-binding domain 34 301 4.3E-66
Gene3D G3DSA:3.40.190.100 - - - 116 243 5.2E-37
Gene3D G3DSA:3.40.190.10 - - - 35 310 5.2E-37
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 28 317 7.6E-75
Coils Coil Coil - - 315 322 -
CDD cd13641 PBP2_HisX_like - - 35 310 1.99568E-119

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.