Pseudomonas aeruginosa UCBPP-PA14, PA14_67550

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30204	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF13411	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF13411	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF46955	Putative DNA-binding domain	IPR009061	Putative DNA-binding domain superfamily	5	123	9.89E-25
Gene3D	G3DSA:1.10.1660.10	-	-	-	1	121	5.0E-25
Pfam	PF13411	MerR HTH family regulatory protein	IPR000551	MerR-type HTH domain	6	67	7.9E-13
PRINTS	PR00040	MerR bacterial regulatory protein HTH signature	IPR000551	MerR-type HTH domain	16	29	6.1E-7
PRINTS	PR00040	MerR bacterial regulatory protein HTH signature	IPR000551	MerR-type HTH domain	39	59	6.1E-7
PRINTS	PR00040	MerR bacterial regulatory protein HTH signature	IPR000551	MerR-type HTH domain	5	16	6.1E-7
SMART	SM00422	merrmega3	IPR000551	MerR-type HTH domain	4	72	5.1E-12
CDD	cd04781	HTH_MerR-like_sg6	-	-	4	120	1.11548E-62
PANTHER	PTHR30204	REDOX-CYCLING DRUG-SENSING TRANSCRIPTIONAL ACTIVATOR SOXR	IPR047057	MerR transcriptional regulator	2	106	5.8E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.