Pseudomonas aeruginosa UCBPP-PA14, PA14_67630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008381 mechanosensitive ion channel activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30460
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF82689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00924
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain IPR011066 Mechanosensitive ion channel MscS, C-terminal 612 712 7.72E-12
FunFam G3DSA:3.30.70.100:FF:000018 MscS mechanosensitive ion channel - - 613 702 5.8E-29
Gene3D G3DSA:3.30.70.100 - - - 614 702 2.4E-17
MobiDBLite mobidb-lite consensus disorder prediction - - 714 735 -
FunFam G3DSA:2.30.30.60:FF:000001 MscS Mechanosensitive ion channel - - 562 611 1.8E-17
SUPERFAMILY SSF50182 Sm-like ribonucleoproteins IPR010920 LSM domain superfamily 547 610 1.83E-12
FunFam G3DSA:1.10.287.1260:FF:000005 Mechanosensitive ion channel family protein - - 442 561 2.2E-35
Gene3D G3DSA:2.30.30.60 - IPR023408 Mechanosensitive ion channel MscS, beta-domain superfamily 563 611 4.9E-14
Pfam PF00924 Mechanosensitive ion channel IPR006685 Mechanosensitive ion channel MscS 504 703 6.0E-39
SUPERFAMILY SSF82861 Mechanosensitive channel protein MscS (YggB), transmembrane region IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 463 545 1.44E-13
PANTHER PTHR30460 UNCHARACTERIZED IPR045276 Mechanosensitive ion channel YbiO 12 732 0.0
Gene3D G3DSA:1.10.287.1260 - - - 444 561 3.2E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.