Pseudomonas aeruginosa UCBPP-PA14, PA14_68130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Antibiotic resistance and susceptibility Other UCBPP-PA14 genes in this class
Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.287.470 Helix hairpin bin - - 115 183 3.6E-9
FunFam G3DSA:2.40.30.170:FF:000003 Multidrug resistance protein A - - 227 349 3.2E-55
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 55 286 4.8E-16
Gene3D G3DSA:2.40.50.100 - - - 55 113 1.3E-7
SUPERFAMILY SSF56954 Outer membrane efflux proteins (OEP) - - 17 206 4.18E-7
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 161 263 2.22E-10
Pfam PF00529 Cation efflux system protein CusB domain 1 IPR043602 Cation efflux system protein CusB, domain 1 33 341 7.4E-15
Gene3D G3DSA:2.40.30.170 - - - 225 347 2.3E-34
PANTHER PTHR30386 MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP - - 13 382 8.2E-70
Coils Coil Coil - - 155 175 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.