Pseudomonas aeruginosa UCBPP-PA14, PA14_69900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd01949 GGDEF IPR000160 GGDEF domain 127 274 6.30214E-36
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 293 547 1.4E-97
SMART SM00052 duf2_2 IPR001633 EAL domain 292 538 7.1E-110
SMART SM00267 duf1_3 IPR000160 GGDEF domain 113 282 9.8E-39
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 298 543 1.18E-87
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 293 547 6.4E-89
CDD cd01948 EAL IPR001633 EAL domain 298 538 8.00288E-111
Pfam PF00563 EAL domain IPR001633 EAL domain 298 533 3.2E-73
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 125 274 1.2E-31
Coils Coil Coil - - 286 306 -
PANTHER PTHR33121 CYCLIC DI-GMP PHOSPHODIESTERASE PDEF - - 90 542 0.0
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 129 284 1.65E-36
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 119 292 1.8E-41
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 120 275 2.4E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.