Pseudomonas aeruginosa UCBPP-PA14, PA14_70710 (glcC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00895 FCD_2 IPR011711 GntR, C-terminal 94 225 3.4E-26
Coils Coil Coil - - 216 246 -
SMART SM00345 gntr3 IPR000524 Transcription regulator HTH, GntR 10 69 5.8E-13
PANTHER PTHR43537 TRANSCRIPTIONAL REGULATOR, GNTR FAMILY - - 3 236 2.1E-45
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 43 59 2.9E-7
Gene3D G3DSA:1.20.120.530 - IPR008920 Transcription regulator FadR/GntR, C-terminal 93 233 2.7E-33
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 1 75 1.1E-20
SUPERFAMILY SSF48008 GntR ligand-binding domain-like IPR008920 Transcription regulator FadR/GntR, C-terminal 91 232 4.58E-26
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 29 43 2.9E-7
Pfam PF07729 FCD domain IPR011711 GntR, C-terminal 94 224 2.2E-26
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 3 73 5.74E-20
CDD cd07377 WHTH_GntR IPR000524 Transcription regulator HTH, GntR 6 70 7.68333E-19
Pfam PF00392 Bacterial regulatory proteins, gntR family IPR000524 Transcription regulator HTH, GntR 7 69 2.9E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.