Pseudomonas aeruginosa UCBPP-PA14, PA14_71490 (soxD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:1901053	sarcosine catabolic process	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA5417	ECO:0000249 sequence similarity evidence used in automatic assertion	17951379
Molecular Function	GO:0008115	sarcosine oxidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF04267	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0046653	tetrahydrofolate metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PF04267	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other UCBPP-PA14 genes in this class Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pau00260	Glycine, serine and threonine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pau01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF04267	Sarcosine oxidase, delta subunit family	IPR006279	Sarcosine oxidase, delta subunit, heterotetrameric	4	84	3.0E-37
NCBIfam	TIGR01374	JCVI: sarcosine oxidase subunit delta family protein	IPR006279	Sarcosine oxidase, delta subunit, heterotetrameric	3	87	7.2E-40
FunFam	G3DSA:3.30.2270.10:FF:000002	Sarcosine oxidase subunit delta	-	-	1	98	1.7E-70
Gene3D	G3DSA:3.30.2270.10	-	IPR038561	Sarcosine oxidase subunit delta superfamily	1	98	2.5E-38

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.