Pseudomonas aeruginosa PA7, PSPA7_3865
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0071973 | bacterial-type flagellum-dependent cell motility |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1461
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
15375113 | |
| Biological Process | GO:0071978 | bacterial-type flagellum-dependent swarming motility |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1461
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
15629949 |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pap02040 | Flagellar assembly | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pap02030 | Bacterial chemotaxis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 63 | 96 | - |
| Gene3D | G3DSA:3.30.1330.60 | - | IPR036737 | OmpA-like domain superfamily | 67 | 255 | 3.8E-37 |
| SUPERFAMILY | SSF103088 | OmpA-like | IPR036737 | OmpA-like domain superfamily | 127 | 240 | 4.58E-30 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 249 | 296 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 66 | 85 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 271 | 286 | - |
| Pfam | PF13677 | Membrane MotB of proton-channel complex MotA/MotB | IPR025713 | Motility protein B-like, N-terminal domain | 4 | 57 | 8.6E-22 |
| Pfam | PF00691 | OmpA family | IPR006665 | OmpA-like domain | 145 | 234 | 8.3E-17 |
| PANTHER | PTHR30329 | STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX | - | - | 2 | 242 | 3.5E-54 |
| CDD | cd07185 | OmpA_C-like | IPR006665 | OmpA-like domain | 134 | 240 | 2.80304E-33 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.