Pseudomonas aeruginosa PA7, PSPA7_3916

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pap02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.20 PAS domain - - 127 249 2.5E-21
Coils Coil Coil - - 10 30 -
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 23 141 2.0E-15
CDD cd11386 MCP_signal - - 265 437 1.03426E-53
SMART SM00283 MA_2 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 246 440 2.6E-25
Gene3D G3DSA:1.10.287.950 - - - 250 438 1.2E-52
SMART SM00086 pac_2 IPR001610 PAC motif 215 257 1.4E-7
PANTHER PTHR24422 CHEMOTAXIS PROTEIN METHYLTRANSFERASE - - 24 431 1.3E-57
CDD cd00130 PAS IPR000014 PAS domain 37 132 1.21216E-11
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 152 254 1.03E-24
CDD cd00130 PAS IPR000014 PAS domain 152 254 1.31037E-11
Coils Coil Coil - - 251 271 -
SMART SM00091 pas_2 IPR000014 PAS domain 140 209 14.0
FunFam G3DSA:3.30.450.20:FF:000103 Methyl-accepting chemotaxis protein - - 20 134 3.8E-51
SMART SM00086 pac_2 IPR001610 PAC motif 93 135 0.017
Pfam PF08447 PAS fold IPR013655 PAS fold-3 165 250 7.5E-15
Pfam PF13426 PAS domain IPR000014 PAS domain 37 132 2.5E-15
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 153 260 4.2E-15
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 30 132 4.75E-26
Gene3D G3DSA:3.30.450.20 PAS domain - - 4 126 5.6E-24
FunFam G3DSA:3.30.450.20:FF:000103 Methyl-accepting chemotaxis protein - - 142 256 5.4E-59
Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 436 3.4E-41
SUPERFAMILY SSF58104 Methyl-accepting chemotaxis protein (MCP) signaling domain - - 248 435 3.92E-57
SMART SM00091 pas_2 IPR000014 PAS domain 18 88 0.0011

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.