Pseudomonas aeruginosa PA7, PSPA7_3931

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00924
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF82689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PA7 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 117 137 -
Gene3D G3DSA:1.10.287.1260 - - - 539 639 4.4E-16
SUPERFAMILY SSF82861 Mechanosensitive channel protein MscS (YggB), transmembrane region IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 539 623 6.67E-13
SUPERFAMILY SSF50182 Sm-like ribonucleoproteins IPR010920 LSM domain superfamily 625 690 6.21E-16
SUPERFAMILY SSF82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain IPR011066 Mechanosensitive ion channel MscS, C-terminal 699 791 3.01E-14
Coils Coil Coil - - 74 94 -
Pfam PF00924 Mechanosensitive ion channel IPR006685 Mechanosensitive ion channel MscS 583 780 1.7E-42
Gene3D G3DSA:3.30.70.100 - - - 698 785 2.7E-11
Pfam PF12607 Protein of unknown function (DUF3772) IPR022249 Domain of unknown function DUF3772 139 199 9.2E-19
Gene3D G3DSA:2.30.30.60 - IPR023408 Mechanosensitive ion channel MscS, beta-domain superfamily 640 688 2.6E-14
PANTHER PTHR30347 POTASSIUM CHANNEL RELATED - - 276 799 2.6E-98

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.