Pseudomonas aeruginosa PA7, PSPA7_3959

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 597 632 1.8E-6
SUPERFAMILY SSF69304 Tricorn protease N-terminal domain - - 498 665 1.27E-5
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 533 572 4.3E-6
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 383 418 2.4E-4
Pfam PF20148 Domain of unknown function (DUF6531) IPR045351 Domain of unknown function DUF6531 46 120 1.0E-13
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 576 611 1.3E-5
Gene3D G3DSA:2.180.10.10 - - - 631 1169 1.7E-77
NCBIfam TIGR03696 JCVI: RHS repeat-associated core domain IPR022385 Rhs repeat-associated core 1107 1170 8.8E-23
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 491 530 4.8E-10
Pfam PF03527 RHS protein IPR001826 RHS protein 1069 1100 2.9E-13
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 930 961 6.0E-4
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 491 527 2.5E-9
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 638 672 1.7E-6
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 533 570 3.3E-7
Gene3D G3DSA:2.180.10.10 - - - 254 630 2.7E-42
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 596 636 6.5E-6
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 929 966 8.5E-5
Coils Coil Coil - - 418 438 -
PRINTS PR00394 RHS protein signature IPR001826 RHS protein 1061 1081 8.2E-15
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 369 401 6.4E-4
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 638 668 4.0E-5
PANTHER PTHR32305 - - - 33 1304 3.0E-60
PRINTS PR00394 RHS protein signature IPR001826 RHS protein 1137 1156 8.2E-15
PRINTS PR00394 RHS protein signature IPR001826 RHS protein 1114 1134 8.2E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.