Pseudomonas aeruginosa PA7, PSPA7_4620 (argD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000521
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008483 transaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000521
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03246
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006525 arginine metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01107
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PA7 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pap01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap00330 Arginine and proline metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00202 Aminotransferase class-III IPR005814 Aminotransferase class-III 20 400 3.3E-127
NCBIfam TIGR03246 JCVI: acetylornithine/succinylornithine family transaminase IPR017652 Acetyl/Succinylornithine transaminase family, bacteria 8 404 0.0
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 30 393 0.0
Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. IPR004636 Acetylornithine/Succinylornithine transaminase family 16 403 70.299789
CDD cd00610 OAT_like IPR005814 Aminotransferase class-III 5 400 0.0
PIRSF PIRSF000521 Transaminase_4ab_Lys_Orn IPR005814 Aminotransferase class-III 172 403 2.6E-32
PIRSF PIRSF000521 Transaminase_4ab_Lys_Orn IPR005814 Aminotransferase class-III 29 165 1.7E-5
PANTHER PTHR11986 AMINOTRANSFERASE CLASS III - - 11 401 0.0
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 16 402 3.19E-127
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 60 305 0.0
FunFam G3DSA:3.40.640.10:FF:000004 Acetylornithine aminotransferase - - 60 306 9.1E-109
NCBIfam TIGR00707 JCVI: acetylornithine/succinylornithine family transaminase IPR004636 Acetylornithine/Succinylornithine transaminase family 16 400 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.