Pseudomonas aeruginosa M18, PAM18_0130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other M18 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG paf01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03831 PhnA domain IPR013988 Protein YjdM, C-terminal 46 113 6.9E-33
SUPERFAMILY SSF82057 Prokaryotic SH3-related domain - - 41 113 9.16E-29
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 43 113 1.6E-36
SUPERFAMILY SSF57783 Zinc beta-ribbon - - 3 37 2.13E-15
PANTHER PTHR30305 UNCHARACTERIZED - - 8 112 3.7E-17
Gene3D G3DSA:2.20.25.10 - - - 1 42 7.1E-23
Pfam PF08274 PhnA Zinc-Ribbon IPR013987 Protein YjdM, N-terminal 3 32 4.0E-17
FunFam G3DSA:2.30.30.40:FF:000013 Alkylphosphonate utilization protein PhnA - - 44 113 1.5E-40
NCBIfam TIGR00686 JCVI: zinc ribbon domain-containing protein YjdM IPR004624 Protein YjdM 4 112 8.7E-50
FunFam G3DSA:2.20.25.10:FF:000003 Alkylphosphonate utilization protein PhnA - - 1 42 1.1E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.