Pseudomonas aeruginosa M18, PAM18_0169

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG paf02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 101 255 3.0E-45
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 19 260 9.7E-69
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 97 259 1.7E-48
NCBIfam NF038266 NCBIFAM: biofilm regulation diguanylate cyclase SiaD - - 7 257 5.0E-118
SMART SM00267 duf1_3 IPR000160 GGDEF domain 89 260 2.6E-56
CDD cd01949 GGDEF IPR000160 GGDEF domain 102 258 4.7159E-62
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 85 261 5.5E-55
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 105 259 1.02E-45
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 95 261 1.2E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.