Pseudomonas aeruginosa M18, PAM18_3862
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_3862
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4287078 - 4288274 (- strand) |
Cross-References
| RefSeq | YP_005976445.1 |
| GI | 386059923 |
| Entrez | 12567916 |
| NCBI Locus Tag | PAM18_3862 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative transglycosylase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 4.42 |
| Kyte-Doolittle Hydrophobicity Value | -0.177 |
| Molecular Weight (kDa) | 42.8 |
| Isoelectric Point (pI) | 9.08 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 7QVD | HYDROLASE | 01/21/22 | X-ray structure of the lytic transglycosylase SltB2 from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.7 | X-RAY DIFFRACTION | 99.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 221 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001129 (305 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_3862
Search term: putative transglycosylase
|
Human Homologs
References
No references are associated with this feature.