Pseudomonas aeruginosa M18, PAM18_4240

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:cd07377	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:cd07377	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other M18 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00345	gntr3	IPR000524	Transcription regulator HTH, GntR	5	63	1.7E-13
Pfam	PF00392	Bacterial regulatory proteins, gntR family	IPR000524	Transcription regulator HTH, GntR	2	63	1.4E-15
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	3	91	1.26E-17
Pfam	PF07729	FCD domain	IPR011711	GntR, C-terminal	73	199	6.1E-30
SMART	SM00895	FCD_2	IPR011711	GntR, C-terminal	73	200	2.3E-26
Gene3D	G3DSA:1.20.120.530	-	IPR008920	Transcription regulator FadR/GntR, C-terminal	67	213	7.4E-35
CDD	cd07377	WHTH_GntR	IPR000524	Transcription regulator HTH, GntR	2	63	1.4414E-14
Coils	Coil	Coil	-	-	91	111	-
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	204	223	-
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	1	64	2.2E-18
PANTHER	PTHR43537	TRANSCRIPTIONAL REGULATOR, GNTR FAMILY	-	-	2	209	1.1E-42
SUPERFAMILY	SSF48008	GntR ligand-binding domain-like	IPR008920	Transcription regulator FadR/GntR, C-terminal	70	207	9.68E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.